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  5. Zm00001e029450_P001

Zm00001e029450_P001


Description : Pentatricopeptide repeat-containing protein At2g46050, mitochondrial OS=Arabidopsis thaliana (sp|o82363|pp203_arath : 279.0)


Gene families : OG0021425 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000789 (LandPlants) Phylogenetic Tree(s): OG_05_0000789_tree ,
OG_06_0000692 (SeedPlants) Phylogenetic Tree(s): OG_06_0000692_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029450_P001
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g15570.1 No alias Pentatricopeptide repeat-containing protein At2g46050,... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 284 332
IPR002885 Pentatricopeptide_repeat 70 114
IPR002885 Pentatricopeptide_repeat 182 231
IPR002885 Pentatricopeptide_repeat 259 279
No external refs found!