Zm00001e029484_P001


Description : Tetraspanin-6 OS=Arabidopsis thaliana (sp|q9c7c1|tet6_arath : 253.0)


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0009086 (LandPlants) Phylogenetic Tree(s): OG_05_0009086_tree ,
OG_06_0005617 (SeedPlants) Phylogenetic Tree(s): OG_06_0005617_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029484_P001
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00197500 evm_27.TU.AmTr_v1... Protein TORNADO 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00019p00136590 evm_27.TU.AmTr_v1... Tetraspanin-8 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00101p00124120 evm_27.TU.AmTr_v1... Tetraspanin-2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT2G23810 TET8 tetraspanin8 0.03 Archaeplastida
AT3G12090 TET6 tetraspanin6 0.04 Archaeplastida
AT4G23410 TET5 tetraspanin5 0.05 Archaeplastida
GSVIVT01013147001 No alias Protein TORNADO 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01016305001 No alias Tetraspanin-5 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01023726001 No alias Tetraspanin-8 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_00679 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_25194 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_25199 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_26509 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_41720 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g12750.1 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os05g03140.1 No alias Tetraspanin-3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g03530.1 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os08g34460.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g25760.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_100296g0010 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_13870g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_24323g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_331856g0010 No alias Tetraspanin-10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp3g07130.1 No alias Tetraspanin-3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c21_1270V3.1 No alias tetraspanin8 0.02 Archaeplastida
Pp3c7_23740V3.1 No alias tetraspanin8 0.02 Archaeplastida
Pp3c8_3750V3.1 No alias tetraspanin10 0.06 Archaeplastida
Smo231326 No alias Tetraspanin-3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo266767 No alias Tetraspanin-8 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc03g059390.3.1 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g049080.4.1 No alias Tetraspanin-5 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc07g006280.3.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g010570.1.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e034206_P001 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 9 245
No external refs found!