Description : Tetraspanin-6 OS=Arabidopsis thaliana (sp|q9c7c1|tet6_arath : 253.0)
Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0009086 (LandPlants) Phylogenetic Tree(s): OG_05_0009086_tree ,
OG_06_0005617 (SeedPlants) Phylogenetic Tree(s): OG_06_0005617_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e029484_P001 | |
Cluster | HCCA: Cluster_150 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00197500 | evm_27.TU.AmTr_v1... | Protein TORNADO 2 OS=Arabidopsis thaliana | 0.05 | Archaeplastida | |
AMTR_s00019p00136590 | evm_27.TU.AmTr_v1... | Tetraspanin-8 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
AMTR_s00101p00124120 | evm_27.TU.AmTr_v1... | Tetraspanin-2 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
AMTR_s00108p00058320 | evm_27.TU.AmTr_v1... | Tetraspanin-6 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
AT2G23810 | TET8 | tetraspanin8 | 0.03 | Archaeplastida | |
AT3G12090 | TET6 | tetraspanin6 | 0.04 | Archaeplastida | |
AT4G23410 | TET5 | tetraspanin5 | 0.05 | Archaeplastida | |
GSVIVT01013147001 | No alias | Protein TORNADO 2 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
GSVIVT01016305001 | No alias | Tetraspanin-5 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
GSVIVT01023726001 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
Gb_00679 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Gb_25194 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
Gb_25199 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
Gb_26509 | No alias | Protein TORNADO 2 OS=Arabidopsis thaliana... | 0.06 | Archaeplastida | |
Gb_41720 | No alias | Protein TORNADO 2 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
LOC_Os02g12750.1 | No alias | Tetraspanin-2 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
LOC_Os05g03140.1 | No alias | Tetraspanin-3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
LOC_Os05g03530.1 | No alias | Tetraspanin-6 OS=Arabidopsis thaliana... | 0.08 | Archaeplastida | |
LOC_Os08g34460.1 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
LOC_Os09g25760.1 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
MA_100296g0010 | No alias | Protein TORNADO 2 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
MA_13870g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_24323g0010 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
MA_331856g0010 | No alias | Tetraspanin-10 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
Mp3g07130.1 | No alias | Tetraspanin-3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
Pp3c21_1270V3.1 | No alias | tetraspanin8 | 0.02 | Archaeplastida | |
Pp3c7_23740V3.1 | No alias | tetraspanin8 | 0.02 | Archaeplastida | |
Pp3c8_3750V3.1 | No alias | tetraspanin10 | 0.06 | Archaeplastida | |
Smo231326 | No alias | Tetraspanin-3 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
Smo266767 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
Solyc03g059390.3.1 | No alias | Tetraspanin-2 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Solyc04g049080.4.1 | No alias | Tetraspanin-5 OS=Arabidopsis thaliana... | 0.06 | Archaeplastida | |
Solyc07g006280.3.1 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Solyc12g010570.1.1 | No alias | Tetraspanin-7 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Zm00001e034206_P001 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0007165 | signal transduction | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR018499 | Tetraspanin/Peripherin | 9 | 245 |
No external refs found! |