Zm00001e029505_P004

Description : Exonuclease V, chloroplastic OS=Arabidopsis thaliana (sp|q9fkk6|exo5_arath : 256.0)

Gene families : OG0008403 (Archaeplastida) Phylogenetic Tree(s): OG0008403_tree ,
OG_05_0009830 (LandPlants) Phylogenetic Tree(s): OG_05_0009830_tree ,
OG_06_0010923 (SeedPlants) Phylogenetic Tree(s): OG_06_0010923_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e029505_P004
Cluster	HCCA: Cluster_70

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00000828.25	No alias	Exonuclease V, chloroplastic OS=Arabidopsis thaliana	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0004529	exodeoxyribonuclease activity	None	Extended
MF	GO:0004536	deoxyribonuclease activity	None	Extended
MF	GO:0008297	single-stranded DNA exodeoxyribonuclease activity	None	Extended
MF	GO:0008409	5'-3' exonuclease activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0016895	exodeoxyribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0035312	5'-3' exodeoxyribonuclease activity	None	Extended
MF	GO:0045145	single-stranded DNA 5'-3' exodeoxyribonuclease activity	IEA	Interproscan
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004177	aminopeptidase activity	IEP	Neighborhood
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0006364	rRNA processing	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
MF	GO:0008649	rRNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0016072	rRNA metabolic process	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR019190	EXOV	89	204
IPR019190	EXOV	300	370
IPR019190	EXOV	212	288

External Links

No external refs found!