Zm00001e029743_P002

Description : component Toc90|Toc120|Toc132|Toc159 of outer envelope TOC translocation system

Gene families : OG0001205 (Archaeplastida) Phylogenetic Tree(s): OG0001205_tree ,
OG_05_0001217 (LandPlants) Phylogenetic Tree(s): OG_05_0001217_tree ,
OG_06_0002057 (SeedPlants) Phylogenetic Tree(s): OG_06_0002057_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e029743_P002
Cluster	HCCA: Cluster_199

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00209230	evm_27.TU.AmTr_v1...	Protein translocation.chloroplast.outer envelope TOC...	0.03	Archaeplastida
AT4G02510	PPI2, ATTOC159,...	translocon at the outer envelope membrane of chloroplasts 159	0.05	Archaeplastida
Cre17.g734300	No alias	Translocase of chloroplast 90, chloroplastic...	0.02	Archaeplastida
GSVIVT01027981001	No alias	Protein translocation.chloroplast.outer envelope TOC...	0.06	Archaeplastida
LOC_Os05g05950.1	No alias	component Toc90\|Toc120\|Toc132\|Toc159 of outer envelope...	0.02	Archaeplastida
MA_10428463g0020	No alias	Translocase of chloroplast 120, chloroplastic...	0.03	Archaeplastida
MA_16870g0010	No alias	component Toc90\|Toc120\|Toc132\|Toc159 of outer envelope...	0.03	Archaeplastida
MA_258608g0010	No alias	component Toc90\|Toc120\|Toc132\|Toc159 of outer envelope...	0.07	Archaeplastida
MA_9202971g0010	No alias	Translocase of chloroplast 132, chloroplastic...	0.04	Archaeplastida
Pp3c11_19567V3.1	No alias	multimeric translocon complex in the outer envelope membrane 132	0.02	Archaeplastida
Pp3c7_3420V3.1	No alias	multimeric translocon complex in the outer envelope membrane 132	0.03	Archaeplastida
Solyc01g080780.2.1	No alias	component Toc90\|Toc120\|Toc132\|Toc159 of outer envelope...	0.16	Archaeplastida
Solyc07g007650.3.1	No alias	component Toc90\|Toc120\|Toc132\|Toc159 of outer envelope...	0.03	Archaeplastida
Solyc09g074940.3.1	No alias	component Toc90\|Toc120\|Toc132\|Toc159 of outer envelope...	0.1	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Neighborhood
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Neighborhood
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003690	double-stranded DNA binding	IEP	Neighborhood
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
MF	GO:0003916	DNA topoisomerase activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
CC	GO:0005694	chromosome	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006265	DNA topological change	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
BP	GO:0071103	DNA conformation change	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR024283	TOC159_MAD	1052	1316
IPR006703	G_AIG1	690	826

External Links

No external refs found!

Zm00001e029743_P002

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation