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  5. Zm00001e029784_P001

Zm00001e029784_P001


Description : PHD finger transcription factor


Gene families : OG0000311 (Archaeplastida) Phylogenetic Tree(s): OG0000311_tree ,
OG_05_0001728 (LandPlants) Phylogenetic Tree(s): OG_05_0001728_tree ,
OG_06_0001860 (SeedPlants) Phylogenetic Tree(s): OG_06_0001860_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029784_P001
Cluster HCCA: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.04 Archaeplastida
LOC_Os06g01170.1 No alias PHD finger transcription factor 0.03 Archaeplastida
MA_139275g0010 No alias PHD finger transcription factor 0.04 Archaeplastida
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 Archaeplastida
MA_3931g0010 No alias PHD finger transcription factor 0.03 Archaeplastida
Mp6g21090.2 No alias PHD finger transcription factor 0.02 Archaeplastida
Solyc09g065340.3.1 No alias PHD finger transcription factor 0.02 Archaeplastida
Solyc09g076010.3.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Solyc11g066480.2.1 No alias PHD finger transcription factor 0.06 Archaeplastida
Zm00001e032904_P002 No alias PHD finger transcription factor 0.04 Archaeplastida
Zm00001e036733_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
InterPro domains Description Start Stop
IPR032308 Jas 357 420
IPR032308 Jas 528 598
No external refs found!