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  5. Zm00001e029825_P001

Zm00001e029825_P001


Description : subunit beta of Cpn60 chaperonin complex. component CPN60b of CPN60 assembly chaperone complex. chaperone (Hsp60)


Gene families : OG0000342 (Archaeplastida) Phylogenetic Tree(s): OG0000342_tree ,
OG_05_0001792 (LandPlants) Phylogenetic Tree(s): OG_05_0001792_tree ,
OG_06_0001989 (SeedPlants) Phylogenetic Tree(s): OG_06_0001989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029825_P001
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00080200 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.04 Archaeplastida
AMTR_s00062p00185880 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.11 Archaeplastida
AMTR_s00106p00119930 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.09 Archaeplastida
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.07 Archaeplastida
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.05 Archaeplastida
AT2G33210 HSP60-2 heat shock protein 60-2 0.03 Archaeplastida
AT3G13470 No alias TCP-1/cpn60 chaperonin family protein 0.03 Archaeplastida
AT3G13860 HSP60-3A heat shock protein 60-3A 0.03 Archaeplastida
ChrSy.fgenesh.mRNA.28 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
Cpa|evm.model.tig00001269.7 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre04.g231222 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
Cre06.g309100 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cre17.g741450 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
GSVIVT01012098001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01016859001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01025490001 No alias External stimuli response.temperature.Hsp... 0.08 Archaeplastida
GSVIVT01029025001 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
GSVIVT01031526001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
LOC_Os06g02380.2 No alias subunit beta of Cpn60 chaperonin complex. component... 0.06 Archaeplastida
LOC_Os09g38980.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.05 Archaeplastida
LOC_Os12g17910.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.05 Archaeplastida
MA_10436772g0010 No alias chaperone (Hsp60) 0.03 Archaeplastida
MA_13240g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_542957g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.06 Archaeplastida
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.07 Archaeplastida
Mp5g20470.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.06 Archaeplastida
Pp3c16_4660V3.1 No alias chaperonin 60 beta 0.04 Archaeplastida
Pp3c24_12180V3.1 No alias chaperonin-60alpha 0.05 Archaeplastida
Pp3c26_2180V3.1 No alias heat shock protein 60 0.02 Archaeplastida
Pp3c27_5110V3.1 No alias chaperonin 60 beta 0.02 Archaeplastida
Pp3c4_22500V3.1 No alias heat shock protein 60 0.02 Archaeplastida
Pp3c6_20400V3.1 No alias chaperonin 60 beta 0.07 Archaeplastida
Pp3c8_16290V3.1 No alias chaperonin-60alpha 0.04 Archaeplastida
Smo165043 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
Smo168153 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
Solyc01g028810.3.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.09 Archaeplastida
Solyc03g120850.4.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.11 Archaeplastida
Solyc09g091180.3.1 No alias chaperone (Hsp60) 0.05 Archaeplastida
Solyc11g069790.2.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.11 Archaeplastida
Zm00001e012733_P002 No alias chaperone (Hsp60) 0.03 Archaeplastida
Zm00001e036666_P003 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004418 hydroxymethylbilane synthase activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004832 valine-tRNA ligase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006438 valyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 101 604
No external refs found!