1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G45460

AT3G45460


Description : IBR domain containing protein


Gene families : OG0000316 (Archaeplastida) Phylogenetic Tree(s): OG0000316_tree ,
OG_05_0004760 (LandPlants) Phylogenetic Tree(s): OG_05_0004760_tree ,
OG_06_0003098 (SeedPlants) Phylogenetic Tree(s): OG_06_0003098_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G45460
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT2G16520 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.14 Archaeplastida
AT2G21420 No alias IBR domain containing protein 0.08 Archaeplastida
AT2G22940 No alias BEST Arabidopsis thaliana protein match is: zinc finger... 0.04 Archaeplastida
AT2G25360 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT2G25370 No alias RING/U-box superfamily protein 0.12 Archaeplastida
AT2G26135 No alias RING/U-box protein with C6HC-type zinc finger 0.03 Archaeplastida
AT3G45470 No alias IBR domain containing protein 0.13 Archaeplastida
AT3G45500 No alias BEST Arabidopsis thaliana protein match is: RING/U-box... 0.09 Archaeplastida
AT3G53690 No alias RING/U-box superfamily protein 0.09 Archaeplastida
Cpa|evm.model.tig00021035.20 No alias No description available 0.01 Archaeplastida
LOC_Os08g35060.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida
LOC_Os08g35070.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida
MA_64485g0010 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.03 Archaeplastida
Solyc01g110080.2.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.05 Archaeplastida
Solyc01g110090.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 51 159
IPR002867 IBR_dom 240 304
No external refs found!