Description : BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25370.1); Has 99 Blast hits to 96 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0000316 (Archaeplastida) Phylogenetic Tree(s): OG0000316_tree ,
OG_05_0004760 (LandPlants) Phylogenetic Tree(s): OG_05_0004760_tree ,
OG_06_0003098 (SeedPlants) Phylogenetic Tree(s): OG_06_0003098_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT3G45490 | |
Cluster | HCCA: Cluster_21 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os09g25200.1 | No alias | plant-specific E3 ubiquitin ligase (RSL/RFA) | 0.05 | Archaeplastida | |
LOC_Os09g26470.1 | No alias | plant-specific E3 ubiquitin ligase (RSL/RFA) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006952 | defense response | IEP | Neighborhood |
BP | GO:0009913 | epidermal cell differentiation | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
BP | GO:0030855 | epithelial cell differentiation | IEP | Neighborhood |
BP | GO:0031537 | regulation of anthocyanin metabolic process | IEP | Neighborhood |
BP | GO:0031540 | regulation of anthocyanin biosynthetic process | IEP | Neighborhood |
MF | GO:0080018 | anthocyanin 5-O-glucosyltransferase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002156 | RNaseH_domain | 36 | 156 |
No external refs found! |