1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G45570

AT3G45570


Description : RING/U-box protein with C6HC-type zinc finger domain


Gene families : OG0000316 (Archaeplastida) Phylogenetic Tree(s): OG0000316_tree ,
OG_05_0004760 (LandPlants) Phylogenetic Tree(s): OG_05_0004760_tree ,
OG_06_0003098 (SeedPlants) Phylogenetic Tree(s): OG_06_0003098_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G45570
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT2G16520 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.14 Archaeplastida
AT2G21420 No alias IBR domain containing protein 0.09 Archaeplastida
AT2G22940 No alias BEST Arabidopsis thaliana protein match is: zinc finger... 0.05 Archaeplastida
AT2G25360 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G25370 No alias RING/U-box superfamily protein 0.13 Archaeplastida
AT2G26135 No alias RING/U-box protein with C6HC-type zinc finger 0.04 Archaeplastida
AT3G45470 No alias IBR domain containing protein 0.18 Archaeplastida
AT3G45500 No alias BEST Arabidopsis thaliana protein match is: RING/U-box... 0.07 Archaeplastida
AT3G45510 No alias RING/U-box protein 0.03 Archaeplastida
AT3G53690 No alias RING/U-box superfamily protein 0.11 Archaeplastida
Cpa|evm.model.tig00021035.20 No alias No description available 0.01 Archaeplastida
MA_64485g0010 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.04 Archaeplastida
Solyc01g110080.2.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.06 Archaeplastida
Solyc01g110090.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0009901 anther dehiscence IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR002867 IBR_dom 238 298
IPR002156 RNaseH_domain 30 145
No external refs found!