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  5. Zm00001e030102_P001

Zm00001e030102_P001


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001120 (LandPlants) Phylogenetic Tree(s): OG_05_0001120_tree ,
OG_06_0020257 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030102_P001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00263220 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00003p00240920 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00056p00122930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G49200 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G04240 XERICO RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.07 Archaeplastida
AT4G24015 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.04 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g15020.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g49710.1 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.03 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os05g45060.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os06g07100.2 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
LOC_Os06g12680.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os06g34650.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os07g34180.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g06090.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g30310.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g39450.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g40460.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_117647g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c6_19030V3.1 No alias RING/U-box superfamily protein 0.05 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g112340.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g007530.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007122_P001 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e020958_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025397_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 146 189
No external refs found!