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  5. Zm00001e030136_P001

Zm00001e030136_P001


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0063354 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030136_P001
Cluster HCCA: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00198340 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G22500 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G72200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G01150 RHA2B RING-H2 finger protein 2B 0.03 Archaeplastida
AT4G11360 RHA1B RING-H2 finger A1B 0.03 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Cpa|evm.model.tig00020876.18 No alias No description available 0.01 Archaeplastida
GSVIVT01012019001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01023776001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_20700 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_30879 No alias Probable E3 ubiquitin-protein ligase XERICO... 0.02 Archaeplastida
Gb_33184 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_35557 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_41046 No alias Putative RING-H2 finger protein ATL12 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g44642.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g29676.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34650.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os07g42610.1 No alias E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os08g37760.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os12g02210.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10200587g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_152102g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_3929631g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_51630g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_6934973g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8362328g0010 No alias Probable E3 ubiquitin-protein ligase XERICO... 0.03 Archaeplastida
Mp2g11860.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp4g15970.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c14_14600V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo137213 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Smo417984 No alias No description available 0.03 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g009780.1.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.05 Archaeplastida
Solyc05g010170.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g051250.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005280.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g007530.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 118 161
No external refs found!