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  5. Zm00001e030668_P001

Zm00001e030668_P001


Description : component RPS24 of SSU proteome


Gene families : OG0002123 (Archaeplastida) Phylogenetic Tree(s): OG0002123_tree ,
OG_05_0001922 (LandPlants) Phylogenetic Tree(s): OG_05_0001922_tree ,
OG_06_0002453 (SeedPlants) Phylogenetic Tree(s): OG_06_0002453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030668_P001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00193110 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
AMTR_s00056p00221450 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
AT3G04920 No alias Ribosomal protein S24e family protein 0.21 Archaeplastida
AT5G28060 No alias Ribosomal protein S24e family protein 0.15 Archaeplastida
Cpa|evm.model.tig00000361.64 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 Archaeplastida
Cre10.g456200 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01001167001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
GSVIVT01021860001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.22 Archaeplastida
Gb_38272 No alias component RPS24 of SSU proteome 0.15 Archaeplastida
LOC_Os01g52490.1 No alias component RPS24 of SSU proteome 0.16 Archaeplastida
LOC_Os02g13530.1 No alias component RPS24 of SSU proteome 0.24 Archaeplastida
LOC_Os06g36160.1 No alias component RPS24 of SSU proteome 0.25 Archaeplastida
MA_119841g0010 No alias component RPS24 of SSU proteome 0.16 Archaeplastida
Mp1g10680.1 No alias component RPS24 of SSU proteome 0.21 Archaeplastida
Pp3c12_10760V3.1 No alias Ribosomal protein S24e family protein 0.1 Archaeplastida
Pp3c12_10870V3.1 No alias Ribosomal protein S24e family protein 0.05 Archaeplastida
Pp3c13_22220V3.1 No alias Ribosomal protein S24e family protein 0.18 Archaeplastida
Pp3c3_19700V3.1 No alias Ribosomal protein S24e family protein 0.19 Archaeplastida
Pp3c4_16900V3.1 No alias Ribosomal protein S24e family protein 0.03 Archaeplastida
Pp3c4_16903V3.1 No alias Ribosomal protein S24e family protein 0.07 Archaeplastida
Smo227903 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Smo271584 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
Solyc01g097870.3.1 No alias component RPS24 of SSU proteome 0.15 Archaeplastida
Solyc06g084230.3.1 No alias component RPS24 of SSU proteome 0.16 Archaeplastida
Solyc09g065330.3.1 No alias component RPS24 of SSU proteome 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001976 Ribosomal_S24e 29 107
No external refs found!