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Description : G2-like GARP transcription factor
Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0017659 (LandPlants) Phylogenetic Tree(s): OG_05_0017659_tree ,
OG_06_0017170 (SeedPlants) Phylogenetic Tree(s): OG_06_0017170_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e030689_P002 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00044p00042560 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | Archaeplastida | |
| AMTR_s00048p00192390 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | Archaeplastida | |
| AMTR_s00094p00028710 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | Archaeplastida | |
| AMTR_s00119p00095480 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | Archaeplastida | |
| AT1G32240 | KAN2 | Homeodomain-like superfamily protein | 0.03 | Archaeplastida | |
| AT2G06020 | No alias | Homeodomain-like superfamily protein | 0.03 | Archaeplastida | |
| AT2G40260 | No alias | Homeodomain-like superfamily protein | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00020710.73 | No alias | No description available | 0.01 | Archaeplastida | |
| GSVIVT01000606001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | Archaeplastida | |
| GSVIVT01001376001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | Archaeplastida | |
| GSVIVT01007065001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | Archaeplastida | |
| GSVIVT01021225001 | No alias | Putative Myb family transcription factor At1g14600... | 0.1 | Archaeplastida | |
| GSVIVT01026319001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | Archaeplastida | |
| GSVIVT01029458001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | Archaeplastida | |
| GSVIVT01033515001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.05 | Archaeplastida | |
| GSVIVT01033528001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | Archaeplastida | |
| Gb_08427 | No alias | G2-like GARP transcription factor | 0.03 | Archaeplastida | |
| Gb_27262 | No alias | G2-like GARP transcription factor | 0.06 | Archaeplastida | |
| Gb_36677 | No alias | G2-like GARP transcription factor | 0.03 | Archaeplastida | |
| Gb_40510 | No alias | G2-like GARP transcription factor | 0.02 | Archaeplastida | |
| LOC_Os02g04640.1 | No alias | G2-like GARP transcription factor | 0.03 | Archaeplastida | |
| LOC_Os05g40960.1 | No alias | G2-like GARP transcription factor | 0.03 | Archaeplastida | |
| LOC_Os06g35140.1 | No alias | G2-like GARP transcription factor | 0.03 | Archaeplastida | |
| LOC_Os07g48596.1 | No alias | G2-like GARP transcription factor | 0.04 | Archaeplastida | |
| LOC_Os11g01480.1 | No alias | Putative Myb family transcription factor At1g14600... | 0.02 | Archaeplastida | |
| LOC_Os12g01490.1 | No alias | Putative Myb family transcription factor At1g14600... | 0.02 | Archaeplastida | |
| MA_138039g0010 | No alias | G2-like GARP transcription factor | 0.04 | Archaeplastida | |
| MA_28188g0010 | No alias | G2-like GARP transcription factor | 0.04 | Archaeplastida | |
| MA_8183372g0010 | No alias | G2-like GARP transcription factor | 0.03 | Archaeplastida | |
| Pp3c3_14670V3.1 | No alias | Homeodomain-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c3_23120V3.1 | No alias | Homeodomain-like superfamily protein | 0.04 | Archaeplastida | |
| Pp3c7_20870V3.1 | No alias | myb-like HTH transcriptional regulator family protein | 0.02 | Archaeplastida | |
| Pp3c8_16910V3.1 | No alias | Homeodomain-like superfamily protein | 0.03 | Archaeplastida | |
| Solyc03g006150.2.1 | No alias | Putative Myb family transcription factor At1g14600... | 0.02 | Archaeplastida | |
| Solyc06g066180.4.1 | No alias | G2-like GARP transcription factor | 0.03 | Archaeplastida | |
| Solyc09g091880.4.1 | No alias | G2-like GARP transcription factor. transcription factor (PHR1) | 0.03 | Archaeplastida | |
| Solyc10g076460.2.1 | No alias | G2-like GARP transcription factor | 0.06 | Archaeplastida | |
| Solyc11g022470.2.1 | No alias | G2-like GARP transcription factor | 0.04 | Archaeplastida | |
| Zm00001e013626_P001 | No alias | G2-like GARP transcription factor | 0.02 | Archaeplastida | |
| Zm00001e037761_P001 | No alias | G2-like GARP transcription factor | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004061 | arylformamidase activity | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006568 | tryptophan metabolic process | IEP | Neighborhood |
| BP | GO:0006569 | tryptophan catabolic process | IEP | Neighborhood |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Neighborhood |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009063 | cellular amino acid catabolic process | IEP | Neighborhood |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Neighborhood |
| BP | GO:0009074 | aromatic amino acid family catabolic process | IEP | Neighborhood |
| BP | GO:0009308 | amine metabolic process | IEP | Neighborhood |
| BP | GO:0009310 | amine catabolic process | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| BP | GO:0016054 | organic acid catabolic process | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Neighborhood |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Neighborhood |
| BP | GO:0019441 | tryptophan catabolic process to kynurenine | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | Neighborhood |
| BP | GO:0042402 | cellular biogenic amine catabolic process | IEP | Neighborhood |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0042436 | indole-containing compound catabolic process | IEP | Neighborhood |
| BP | GO:0042537 | benzene-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Neighborhood |
| BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0044282 | small molecule catabolic process | IEP | Neighborhood |
| BP | GO:0046218 | indolalkylamine catabolic process | IEP | Neighborhood |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| BP | GO:0070189 | kynurenine metabolic process | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Neighborhood |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Neighborhood |
| BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 126 | 176 |
| No external refs found! |