AT3G46130 (ATMYB48-1, MYB48,...)

Aliases : ATMYB48-1, MYB48, ATMYB48-2, ATMYB48, ATMYB48-3

Description : myb domain protein 48

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000113 (SeedPlants) Phylogenetic Tree(s): OG_06_0000113_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G46130
Cluster	HCCA: Cluster_212

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00219710	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
AMTR_s00006p00267240	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00009p00263240	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
AMTR_s00010p00267100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00024p00224180	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00024p00224470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00039p00172240	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
AMTR_s00044p00189590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
AMTR_s00076p00157170	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s01267p00006490	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AT1G16490	MYB58, ATMYB58	myb domain protein 58	0.03	Archaeplastida
AT1G18570	AtMYB51, BW51B,...	myb domain protein 51	0.04	Archaeplastida
AT2G02820	MYB88, AtMYB88	myb domain protein 88	0.06	Archaeplastida
AT3G01530	MYB57, ATMYB57	myb domain protein 57	0.03	Archaeplastida
AT3G08500	AtMYB83, MYB83	myb domain protein 83	0.05	Archaeplastida
AT3G13540	ATMYB5, MYB5	myb domain protein 5	0.05	Archaeplastida
AT3G47600	ATMYB94, ATMYBCP70, MYB94	myb domain protein 94	0.06	Archaeplastida
AT3G50060	MYB77	myb domain protein 77	0.07	Archaeplastida
AT4G13480	AtMYB79, MYB79	myb domain protein 79	0.04	Archaeplastida
AT4G25560	AtMYB18, MYB18	myb domain protein 18	0.03	Archaeplastida
AT5G39700	MYB89, AtMYB89	myb domain protein 89	0.03	Archaeplastida
AT5G52260	MYB19, AtMYB19	myb domain protein 19	0.06	Archaeplastida
Cre16.g677382	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01000449001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
GSVIVT01000450001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01008484001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01009280001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01012777001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
GSVIVT01015575001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01020038001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01026868001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01027493001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01027810001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
GSVIVT01028328001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
GSVIVT01029145001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
GSVIVT01029904001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.06	Archaeplastida
GSVIVT01032564001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Gb_02419	No alias	transcription factor (MYB)	0.02	Archaeplastida
Gb_11232	No alias	transcription factor (MYB)	0.02	Archaeplastida
Gb_22239	No alias	transcription factor (MYB)	0.02	Archaeplastida
Gb_29789	No alias	transcription factor (MYB)	0.02	Archaeplastida
Gb_33428	No alias	transcription factor (MYB)	0.03	Archaeplastida
Gb_35539	No alias	transcription factor (MYB)	0.05	Archaeplastida
Gb_39852	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os01g07450.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os01g36460.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os01g45090.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os01g51260.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os01g74410.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os03g19120.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os03g26130.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os03g27090.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
LOC_Os03g56090.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os04g38740.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os04g45060.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os05g28320.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os05g48010.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os06g10350.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os06g14670.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os06g43090.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os08g15020.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os09g26170.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os10g33810.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os11g03440.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os11g10130.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os11g45740.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os11g47460.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_101790g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_10431212g0010	No alias	transcription factor (MYB)	0.05	Archaeplastida
MA_10431610g0040	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_117992g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_12445g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_128871g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_139924g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_15687g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_190973g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_24271g0020	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_31666g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_79447g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_83918g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_8464929g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_95339g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_9818613g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
Mp1g09420.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Pp3c1_4970V3.1	No alias	myb domain protein 106	0.02	Archaeplastida
Pp3c2_34670V3.1	No alias	myb domain protein 105	0.03	Archaeplastida
Pp3c7_21220V3.1	No alias	myb domain protein 105	0.03	Archaeplastida
Pp3c9_10290V3.1	No alias	myb domain protein 55	0.05	Archaeplastida
Smo84608	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
Solyc02g082040.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc02g086690.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc02g093740.3.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
Solyc03g005570.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc04g014470.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc04g077260.3.1	No alias	transcription factor (MYB)	0.07	Archaeplastida
Solyc04g079360.1.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc05g007710.3.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
Solyc05g009230.3.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc05g014290.4.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc05g048830.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc06g074910.3.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc06g083900.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc07g006750.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc08g005870.2.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc10g005760.3.1	No alias	transcription factor (MYB). transcriptional key...	0.03	Archaeplastida
Solyc11g011050.2.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e002893_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e004128_P003	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e004140_P002	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e005823_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e008489_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e009849_P001	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e010546_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e011944_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e013452_P001	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e015239_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e015884_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e018186_P001	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e020004_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e020963_P001	No alias	transcription factor (MYB)	0.06	Archaeplastida
Zm00001e022450_P001	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e023277_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e025724_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e026166_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e028201_P001	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e029816_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e030775_P002	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e034214_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e034807_P001	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e038964_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e039235_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009751	response to salicylic acid	IEP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042493	response to drug	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046677	response to antibiotic	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
BP	GO:0010082	regulation of root meristem growth	IEP	Neighborhood
BP	GO:0010101	post-embryonic root morphogenesis	IEP	Neighborhood
BP	GO:0010102	lateral root morphogenesis	IEP	Neighborhood
BP	GO:0010315	auxin efflux	IEP	Neighborhood
BP	GO:0010540	basipetal auxin transport	IEP	Neighborhood
BP	GO:0010541	acropetal auxin transport	IEP	Neighborhood
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	Neighborhood
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
BP	GO:0080160	selenate transport	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood
BP	GO:2000280	regulation of root development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	62	106
IPR001005	SANT/Myb	9	56

External Links

No external refs found!

AT3G46130 (ATMYB48-1, MYB48,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation