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  5. AT3G46190

AT3G46190


Description : TRAF-like family protein


Gene families : OG0004283 (Archaeplastida) Phylogenetic Tree(s): OG0004283_tree ,
OG_05_0002958 (LandPlants) Phylogenetic Tree(s): OG_05_0002958_tree ,
OG_06_0001776 (SeedPlants) Phylogenetic Tree(s): OG_06_0001776_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G46190
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT3G20370 No alias TRAF-like family protein 0.03 Archaeplastida
AT3G22085 No alias No description available 0.02 Archaeplastida
AT4G09770 No alias TRAF-like family protein 0.05 Archaeplastida
AT4G09780 No alias TRAF-like family protein 0.04 Archaeplastida
AT5G26260 No alias TRAF-like family protein 0.02 Archaeplastida
AT5G26280 No alias TRAF-like family protein 0.05 Archaeplastida
AT5G26320 No alias TRAF-like family protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 44 136
IPR002083 MATH/TRAF_dom 168 281
No external refs found!