Description : component RPS17 of SSU proteome
Gene families : OG0002265 (Archaeplastida) Phylogenetic Tree(s): OG0002265_tree ,
OG_05_0002018 (LandPlants) Phylogenetic Tree(s): OG_05_0002018_tree ,
OG_06_0002044 (SeedPlants) Phylogenetic Tree(s): OG_06_0002044_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e030769_P001 | |
Cluster | HCCA: Cluster_137 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00030p00243530 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.09 | Archaeplastida | |
AT2G04390 | No alias | Ribosomal S17 family protein | 0.03 | Archaeplastida | |
AT2G05220 | No alias | Ribosomal S17 family protein | 0.08 | Archaeplastida | |
AT3G10610 | No alias | Ribosomal S17 family protein | 0.13 | Archaeplastida | |
AT5G04800 | No alias | Ribosomal S17 family protein | 0.13 | Archaeplastida | |
Cre12.g498250 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | Archaeplastida | |
GSVIVT01033920001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | Archaeplastida | |
GSVIVT01034653001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.12 | Archaeplastida | |
LOC_Os03g01900.1 | No alias | component RPS17 of SSU proteome | 0.07 | Archaeplastida | |
LOC_Os10g27190.1 | No alias | component RPS17 of SSU proteome | 0.11 | Archaeplastida | |
MA_184894g0010 | No alias | component RPS17 of SSU proteome | 0.08 | Archaeplastida | |
MA_217540g0010 | No alias | component RPS17 of SSU proteome | 0.02 | Archaeplastida | |
Mp8g18950.1 | No alias | component RPS17 of SSU proteome | 0.1 | Archaeplastida | |
Pp3c11_2530V3.1 | No alias | Ribosomal S17 family protein | 0.08 | Archaeplastida | |
Pp3c11_2540V3.1 | No alias | Ribosomal S17 family protein | 0.1 | Archaeplastida | |
Pp3c2_34780V3.1 | No alias | Ribosomal S17 family protein | 0.1 | Archaeplastida | |
Pp3c7_21070V3.1 | No alias | Ribosomal S17 family protein | 0.02 | Archaeplastida | |
Pp3c7_21140V3.1 | No alias | Ribosomal S17 family protein | 0.1 | Archaeplastida | |
Smo270936 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | Archaeplastida | |
Solyc05g055230.2.1 | No alias | component RPS17 of SSU proteome | 0.12 | Archaeplastida | |
Solyc10g150146.1.1 | No alias | component RPS17 of SSU proteome | 0.1 | Archaeplastida | |
Solyc11g006690.1.1 | No alias | component RPS17 of SSU proteome | 0.17 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | Neighborhood |
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
CC | GO:0005739 | mitochondrion | IEP | Neighborhood |
CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
BP | GO:0009056 | catabolic process | IEP | Neighborhood |
BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Neighborhood |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Neighborhood |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Neighborhood |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Neighborhood |
BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001210 | Ribosomal_S17e | 1 | 119 |
No external refs found! |