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  5. Zm00001e030830_P002

Zm00001e030830_P002


Description : poly(A) RNA polymerase regulatory protein


Gene families : OG0001318 (Archaeplastida) Phylogenetic Tree(s): OG0001318_tree ,
OG_05_0001428 (LandPlants) Phylogenetic Tree(s): OG_05_0001428_tree ,
OG_06_0001398 (SeedPlants) Phylogenetic Tree(s): OG_06_0001398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030830_P002
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AT5G51120 ATPABN1, PABN1 polyadenylate-binding protein 1 0.07 Archaeplastida
Cpa|evm.model.tig00001628.7 No alias RNA processing.RNA 3-end polyadenylation.poly(A) RNA... 0.01 Archaeplastida
Cre06.g274500 No alias RNA processing.RNA 3-end polyadenylation.poly(A) RNA... 0.01 Archaeplastida
Gb_22701 No alias poly(A) RNA polymerase regulatory protein 0.04 Archaeplastida
Pp3c22_11600V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Solyc03g094080.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036139_P002 No alias poly(A) RNA polymerase regulatory protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004864 protein phosphatase inhibitor activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019212 phosphatase inhibitor activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 83 151
No external refs found!