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  5. Zm00001e030877_P001

Zm00001e030877_P001


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001120 (LandPlants) Phylogenetic Tree(s): OG_05_0001120_tree ,
OG_06_0005078 (SeedPlants) Phylogenetic Tree(s): OG_06_0005078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030877_P001
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
AT1G72310 ATL3 RING/U-box superfamily protein 0.04 Archaeplastida
AT1G74410 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_30879 No alias Probable E3 ubiquitin-protein ligase XERICO... 0.03 Archaeplastida
LOC_Os01g11490.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g44642.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_1252g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_177169g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_772565g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c21_17280V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005280.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e015805_P001 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e021729_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e022781_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 170 213
No external refs found!