Zm00001e030952_P002


Description : transcription factor (BBX-CO)


Gene families : OG0000884 (Archaeplastida) Phylogenetic Tree(s): OG0000884_tree ,
OG_05_0000594 (LandPlants) Phylogenetic Tree(s): OG_05_0000594_tree ,
OG_06_0000583 (SeedPlants) Phylogenetic Tree(s): OG_06_0000583_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030952_P002
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AT1G07050 No alias CCT motif family protein 0.04 Archaeplastida
AT5G14370 No alias CCT motif family protein 0.04 Archaeplastida
AT5G57180 CIA2 chloroplast import apparatus 2 0.03 Archaeplastida
Gb_03285 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
LOC_Os02g49880.1 No alias transcription factor (BBX-CO) 0.04 Archaeplastida
Solyc03g119540.3.1 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Solyc07g008540.3.1 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Zm00001e029234_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000315 Znf_B-box 22 63
IPR010402 CCT_domain 397 439
No external refs found!