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  5. Zm00001e030972_P001

Zm00001e030972_P001


Description : mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP trafficking complex


Gene families : OG0001027 (Archaeplastida) Phylogenetic Tree(s): OG0001027_tree ,
OG_05_0000803 (LandPlants) Phylogenetic Tree(s): OG_05_0000803_tree ,
OG_06_0000994 (SeedPlants) Phylogenetic Tree(s): OG_06_0000994_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030972_P001
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT5G59950 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
Cre10.g462250 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
LOC_Os07g13280.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 Archaeplastida
LOC_Os08g33120.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 Archaeplastida
Pp3c16_21370V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
BP GO:0008154 actin polymerization or depolymerization IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
BP GO:0030041 actin filament polymerization IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Neighborhood
CC GO:0042575 DNA polymerase complex IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
CC GO:0043625 delta DNA polymerase complex IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 111 179
No external refs found!