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  5. Zm00001e031105_P001

Zm00001e031105_P001


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000056 (SeedPlants) Phylogenetic Tree(s): OG_06_0000056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031105_P001
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G72220 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G01150 RHA2B RING-H2 finger protein 2B 0.07 Archaeplastida
AT3G62690 ATL5 AtL5 0.03 Archaeplastida
AT4G35840 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.01 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_05005 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os08g34550.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os10g39450.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_2679g0010 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5319g0010 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Pp3c20_11600V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Solyc05g010170.2.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 113 156
No external refs found!