- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (BBX-DBB)
Gene families : OG0000461 (Archaeplastida) Phylogenetic Tree(s): OG0000461_tree ,
OG_05_0000694 (LandPlants) Phylogenetic Tree(s): OG_05_0000694_tree ,
OG_06_0014053 (SeedPlants) Phylogenetic Tree(s): OG_06_0014053_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e031265_P001 | |
| Cluster | HCCA: Cluster_320 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00250410 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | Archaeplastida | |
| AMTR_s00182p00043350 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | Archaeplastida | |
| AT4G39070 | No alias | B-box zinc finger family protein | 0.02 | Archaeplastida | |
| GSVIVT01010794001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | Archaeplastida | |
| LOC_Os01g10580.1 | No alias | transcription factor (BBX-DBB) | 0.05 | Archaeplastida | |
| LOC_Os02g39360.1 | No alias | transcription factor (BBX-DBB) | 0.04 | Archaeplastida | |
| LOC_Os02g43170.1 | No alias | transcription factor (BBX-DBB) | 0.03 | Archaeplastida | |
| LOC_Os06g49880.1 | No alias | transcription factor (BBX-DBB) | 0.03 | Archaeplastida | |
| LOC_Os09g35880.1 | No alias | transcription factor (BBX-DBB) | 0.03 | Archaeplastida | |
| Solyc01g110370.4.1 | No alias | transcription factor (BBX-DBB) | 0.05 | Archaeplastida | |
| Zm00001e030183_P001 | No alias | transcription factor (BBX-DBB) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Neighborhood |
| MF | GO:0071949 | FAD binding | IEP | Neighborhood |
| BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000315 | Znf_B-box | 60 | 92 |
| No external refs found! |