Zm00001e031368_P002

Description : A-class RAB GTPase

Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0000161 (LandPlants) Phylogenetic Tree(s): OG_05_0000161_tree ,
OG_06_0000127 (SeedPlants) Phylogenetic Tree(s): OG_06_0000127_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e031368_P002
Cluster	HCCA: Cluster_170

Target	Alias	Description	ECC score	Gene Family Method
AT1G73640	RABA6a, AtRABA6a	RAB GTPase homolog A6A	0.05	Archaeplastida
AT3G12160	RABA4D, ATRABA4D	RAB GTPase homolog A4D	0.02	Archaeplastida
Cre03.g189250	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.04	Archaeplastida
GSVIVT01020651001	No alias	Ras-related protein RABA1e OS=Arabidopsis thaliana	0.06	Archaeplastida
GSVIVT01021253001	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.04	Archaeplastida
GSVIVT01023225001	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.03	Archaeplastida
Gb_18969	No alias	Ras-related protein RABA1d OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os01g54590.1	No alias	A-class RAB GTPase	0.04	Archaeplastida
LOC_Os05g20050.1	No alias	A-class RAB GTPase	0.11	Archaeplastida
LOC_Os05g44070.1	No alias	A-class RAB GTPase	0.03	Archaeplastida
LOC_Os09g15790.1	No alias	A-class RAB GTPase	0.02	Archaeplastida
LOC_Os10g23100.1	No alias	A-class RAB GTPase	0.03	Archaeplastida
MA_59492g0010	No alias	A-class RAB GTPase	0.02	Archaeplastida
Pp3c14_15310V3.1	No alias	RAB GTPase homolog A2B	0.02	Archaeplastida
Pp3c23_7840V3.1	No alias	RAB GTPase homolog A4D	0.03	Archaeplastida
Smo146310	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.03	Archaeplastida
Solyc11g010100.2.1	No alias	A-class RAB GTPase	0.03	Archaeplastida
Zm00001e020213_P001	No alias	A-class RAB GTPase	0.03	Archaeplastida
Zm00001e033825_P001	No alias	A-class RAB GTPase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Neighborhood
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006555	methionine metabolic process	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Neighborhood
MF	GO:0008172	S-methyltransferase activity	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009086	methionine biosynthetic process	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	173

External Links

No external refs found!

Zm00001e031368_P002

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation