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  5. Zm00001e031439_P001

Zm00001e031439_P001


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0068324 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0021988 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031439_P001
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00018p00191870 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00077p00074350 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT2G18670 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_20461 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g33720.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g29676.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os06g07100.2 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g12560.1 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_308999g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_479316g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Smo412609 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc02g087040.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc04g074790.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 239 282
No external refs found!