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  5. Zm00001e031477_P002

Zm00001e031477_P002


Description : RING-v-class E3 ligase


Gene families : OG0000436 (Archaeplastida) Phylogenetic Tree(s): OG0000436_tree ,
OG_05_0009096 (LandPlants) Phylogenetic Tree(s): OG_05_0009096_tree ,
OG_06_0007079 (SeedPlants) Phylogenetic Tree(s): OG_06_0007079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031477_P002
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00126340 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT5G38070 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Archaeplastida
GSVIVT01028110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01032601001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os01g66970.1 No alias RING-v-class E3 ligase 0.03 Archaeplastida
LOC_Os05g28730.1 No alias RING-v-class E3 ligase 0.08 Archaeplastida
Solyc03g116030.4.1 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Solyc08g014080.4.1 No alias RING-v-class E3 ligase 0.07 Archaeplastida
Zm00001e021220_P001 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Zm00001e026209_P003 No alias RING-v-class E3 ligase 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 20 67
IPR022143 DUF3675 73 193
No external refs found!