Zm00001e031588_P002


Description : RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase


Gene families : OG0000720 (Archaeplastida) Phylogenetic Tree(s): OG0000720_tree ,
OG_05_0003700 (LandPlants) Phylogenetic Tree(s): OG_05_0003700_tree ,
OG_06_0004180 (SeedPlants) Phylogenetic Tree(s): OG_06_0004180_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031588_P002
Cluster HCCA: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
AT1G20320 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004274 FCP1_dom 164 311
IPR001357 BRCT_dom 378 451
No external refs found!