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  5. AT3G47050

AT3G47050


Description : Glycosyl hydrolase family protein


Gene families : OG0000439 (Archaeplastida) Phylogenetic Tree(s): OG0000439_tree ,
OG_05_0000476 (LandPlants) Phylogenetic Tree(s): OG_05_0000476_tree ,
OG_06_0000400 (SeedPlants) Phylogenetic Tree(s): OG_06_0000400_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47050
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00215880 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.05 Archaeplastida
LOC_Os02g03870.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Archaeplastida
LOC_Os03g53790.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Archaeplastida
Mp4g13480.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0005975 carbohydrate metabolic process ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006824 cobalt ion transport IEP Neighborhood
CC GO:0009705 plant-type vacuole membrane IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
MF GO:0015087 cobalt ion transmembrane transporter activity IEP Neighborhood
MF GO:0015099 nickel cation transmembrane transporter activity IEP Neighborhood
BP GO:0015675 nickel cation transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
MF GO:0030551 cyclic nucleotide binding IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0055068 cobalt ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0071695 anatomical structure maturation IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 29 357
IPR002772 Glyco_hydro_3_C 394 602
No external refs found!