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  5. Zm00001e031774_P001

Zm00001e031774_P001


Description : transcription factor (TUB)


Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree ,
OG_05_0000295 (LandPlants) Phylogenetic Tree(s): OG_05_0000295_tree ,
OG_06_0000341 (SeedPlants) Phylogenetic Tree(s): OG_06_0000341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031774_P001
Cluster HCCA: Cluster_366

Target Alias Description ECC score Gene Family Method Actions
AT1G76900 AtTLP1, TLP1 tubby like protein 1 0.04 Archaeplastida
AT5G18680 AtTLP11, TLP11 tubby like protein 11 0.04 Archaeplastida
GSVIVT01018940001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.06 Archaeplastida
Gb_21935 No alias transcription factor (TUB) 0.03 Archaeplastida
Pp3c24_19540V3.1 No alias tubby like protein 3 0.05 Archaeplastida
Solyc02g062670.3.1 No alias transcription factor (TUB) 0.04 Archaeplastida
Solyc07g062390.4.1 No alias transcription factor (TUB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 66 119
IPR000007 Tubby_C 130 493
No external refs found!