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  5. AT3G47140

AT3G47140


Description : F-box associated ubiquitination effector family protein


Gene families : OG0000466 (Archaeplastida) Phylogenetic Tree(s): OG0000466_tree ,
OG_05_0000239 (LandPlants) Phylogenetic Tree(s): OG_05_0000239_tree ,
OG_06_0000111 (SeedPlants) Phylogenetic Tree(s): OG_06_0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47140
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AT1G19160 No alias F-box family protein 0.02 Archaeplastida
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 Archaeplastida
AT1G46840 No alias F-box family protein 0.04 Archaeplastida
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G10790 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT5G22791 No alias F-box family protein 0.07 Archaeplastida
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0080117 secondary growth IEP Neighborhood
BP GO:0080190 lateral growth IEP Neighborhood
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 53 188
No external refs found!