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  5. Zm00001e032059_P001

Zm00001e032059_P001


Description : cyclic nucleotide-gated cation channel (CNGC)


Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0001872 (LandPlants) Phylogenetic Tree(s): OG_05_0001872_tree ,
OG_06_0007961 (SeedPlants) Phylogenetic Tree(s): OG_06_0007961_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032059_P001
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g55100.1 No alias cyclic nucleotide-gated cation channel (CNGC).... 0.03 Archaeplastida
LOC_Os05g42250.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
MA_167620g0010 No alias cyclic nucleotide-gated cation channel (CNGC).... 0.05 Archaeplastida
MA_212367g0010 No alias Putative cyclic nucleotide-gated ion channel 19... 0.04 Archaeplastida
Mp3g14660.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Pp3c13_22730V3.1 No alias cyclic nucleotide gated channel 5 0.03 Archaeplastida
Solyc03g116850.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Solyc06g051920.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Solyc09g007840.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc10g006800.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.09 Archaeplastida
Solyc12g005400.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 491 578
IPR005821 Ion_trans_dom 161 396
No external refs found!