Description : transcription factor (TUB)

Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree ,
OG_05_0000295 (LandPlants) Phylogenetic Tree(s): OG_05_0000295_tree ,
OG_06_0005934 (SeedPlants) Phylogenetic Tree(s): OG_06_0005934_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Zm00001e032131_P001
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AT1G76900 AtTLP1, TLP1 tubby like protein 1 0.03 Archaeplastida
AT5G18680 AtTLP11, TLP11 tubby like protein 11 0.03 Archaeplastida
Pp3c24_19540V3.1 No alias tubby like protein 3 0.04 Archaeplastida
Smo83983 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
Zm00001e019166_P001 No alias transcription factor (TUB) 0.02 Archaeplastida
Zm00001e039448_P004 No alias transcription factor (TUB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000007 Tubby_C 110 362
IPR001810 F-box_dom 47 92
No external refs found!