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  5. Zm00001e032183_P001

Zm00001e032183_P001


Description : ERD2 COPI trafficking K/HDEL-signature receptor


Gene families : OG0002554 (Archaeplastida) Phylogenetic Tree(s): OG0002554_tree ,
OG_05_0003007 (LandPlants) Phylogenetic Tree(s): OG_05_0003007_tree ,
OG_06_0003217 (SeedPlants) Phylogenetic Tree(s): OG_06_0003217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032183_P001
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00151300 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
AT3G25040 ERD2B endoplasmic reticulum retention defective 2B 0.05 Archaeplastida
Cpa|evm.model.tig00000829.17 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
Cre01.g051400 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
GSVIVT01021057001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
LOC_Os04g30800.2 No alias ERD2 COPI trafficking K/HDEL-signature receptor 0.03 Archaeplastida
LOC_Os11g28340.1 No alias ERD2 COPI trafficking K/HDEL-signature receptor 0.02 Archaeplastida
MA_118868g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c15_12830V3.1 No alias endoplasmic reticulum retention defective 2B 0.01 Archaeplastida
Pp3c9_13230V3.1 No alias endoplasmic reticulum retention defective 2B 0.02 Archaeplastida
Smo143476 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Smo75833 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
Zm00001e008905_P001 No alias ERD2 COPI trafficking K/HDEL-signature receptor 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0046923 ER retention sequence binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000133 ER_ret_rcpt 28 171
No external refs found!