AT1G15100 (RHA2A)

Aliases : RHA2A

Description : RING-H2 finger A2A

Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0013909 (LandPlants) Phylogenetic Tree(s): OG_05_0013909_tree ,
OG_06_0013812 (SeedPlants) Phylogenetic Tree(s): OG_06_0013812_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G15100
Cluster	HCCA: Cluster_222

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00267830	evm_27.TU.AmTr_v1...	Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase	0.03	Archaeplastida
AMTR_s00012p00151770	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.08	Archaeplastida
AMTR_s00022p00051710	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
AMTR_s00152p00054630	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.02	Archaeplastida
AT1G74410	No alias	RING/U-box superfamily protein	0.04	Archaeplastida
AT3G18773	No alias	RING/U-box superfamily protein	0.05	Archaeplastida
AT4G11360	RHA1B	RING-H2 finger A1B	0.05	Archaeplastida
AT4G11370	RHA1A	RING-H2 finger A1A	0.03	Archaeplastida
AT4G15975	No alias	RING/U-box superfamily protein	0.03	Archaeplastida
AT4G17905	ATL4H	RING/U-box superfamily protein	0.04	Archaeplastida
AT4G24015	No alias	RING/U-box superfamily protein	0.03	Archaeplastida
Cpa\|evm.model.tig00020629.137	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
GSVIVT01000538001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
GSVIVT01008756001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
GSVIVT01019585001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.07	Archaeplastida
GSVIVT01024698001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
GSVIVT01034700001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.07	Archaeplastida
GSVIVT01038717001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
Gb_03946	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_04645	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
Gb_14312	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
Gb_14762	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
Gb_14821	No alias	RHA2 signal transducer of abscisic acid perception	0.08	Archaeplastida
LOC_Os02g45390.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
LOC_Os02g45710.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os02g46340.1	No alias	E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os02g50930.1	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
LOC_Os03g05570.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
LOC_Os04g49160.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os06g07100.2	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
LOC_Os06g09310.1	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
LOC_Os06g14650.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os06g34560.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os07g06560.1	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
LOC_Os08g38460.1	No alias	ubiquitin protein ligase (XERICO)	0.02	Archaeplastida
LOC_Os08g43670.1	No alias	NEP1-interacting protein 2 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os12g24490.1	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
LOC_Os12g42540.1	No alias	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10435495g0010	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
MA_114175g0010	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
MA_31462g0010	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
MA_393170g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_462422g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_759689g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_786911g0010	No alias	RING-H2-class E3 ligase	0.06	Archaeplastida
MA_85088g0010	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
MA_904294g0010	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
Mp3g00390.1	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
Solyc01g066430.3.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
Solyc01g105620.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc02g068415.1.1	No alias	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Solyc02g082420.3.1	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
Solyc03g114190.1.1	No alias	RING-H2 finger protein ATL56 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc04g074790.3.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
Solyc04g074820.3.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
Solyc06g061250.3.1	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
Solyc09g010650.1.1	No alias	RING-H2 finger protein ATL33 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc09g089890.1.1	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
Solyc11g005300.2.1	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
Zm00001e000398_P001	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
Zm00001e002233_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e002272_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e007103_P001	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
Zm00001e007129_P001	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
Zm00001e008560_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e009988_P001	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
Zm00001e010029_P001	No alias	ubiquitin protein ligase (XERICO)	0.04	Archaeplastida
Zm00001e022175_P001	No alias	RING-H2-class E3 ligase	0.05	Archaeplastida
Zm00001e022781_P001	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
Zm00001e029032_P001	No alias	RING-H2-class E3 ligase	0.1	Archaeplastida
Zm00001e031874_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e035560_P001	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IMP	Interproscan
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	None	Extended
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IMP	Interproscan
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0016567	protein ubiquitination	IDA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0047484	regulation of response to osmotic stress	IMP	Interproscan
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901419	regulation of response to alcohol	None	Extended
BP	GO:1901421	positive regulation of response to alcohol	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1905957	regulation of cellular response to alcohol	None	Extended
BP	GO:1905959	positive regulation of cellular response to alcohol	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0003993	acid phosphatase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
CC	GO:0005874	microtubule	IEP	Neighborhood
CC	GO:0005881	cytoplasmic microtubule	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0007155	cell adhesion	IEP	Neighborhood
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Neighborhood
BP	GO:0009913	epidermal cell differentiation	IEP	Neighborhood
BP	GO:0010090	trichome morphogenesis	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0010410	hemicellulose metabolic process	IEP	Neighborhood
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0022610	biological adhesion	IEP	Neighborhood
BP	GO:0030832	regulation of actin filament length	IEP	Neighborhood
BP	GO:0030833	regulation of actin filament polymerization	IEP	Neighborhood
BP	GO:0030838	positive regulation of actin filament polymerization	IEP	Neighborhood
BP	GO:0030855	epithelial cell differentiation	IEP	Neighborhood
BP	GO:0030865	cortical cytoskeleton organization	IEP	Neighborhood
BP	GO:0031122	cytoplasmic microtubule organization	IEP	Neighborhood
BP	GO:0031334	positive regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0032271	regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032273	positive regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Neighborhood
BP	GO:0032970	regulation of actin filament-based process	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0043254	regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0043622	cortical microtubule organization	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
BP	GO:0045010	actin nucleation	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
BP	GO:0045492	xylan biosynthetic process	IEP	Neighborhood
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	Neighborhood
CC	GO:0055028	cortical microtubule	IEP	Neighborhood
BP	GO:0055062	phosphate ion homeostasis	IEP	Neighborhood
BP	GO:0055081	anion homeostasis	IEP	Neighborhood
BP	GO:0055083	monovalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0072505	divalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0072506	trivalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood
CC	GO:0099080	supramolecular complex	IEP	Neighborhood
CC	GO:0099081	supramolecular polymer	IEP	Neighborhood
CC	GO:0099512	supramolecular fiber	IEP	Neighborhood
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	Neighborhood
BP	GO:0110053	regulation of actin filament organization	IEP	Neighborhood
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Neighborhood
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	85	128

External Links

No external refs found!

AT1G15100 (RHA2A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation