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  5. Zm00001e032277_P001

Zm00001e032277_P001


Description : no hits & (original description: none)


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0000202 (LandPlants) Phylogenetic Tree(s): OG_05_0000202_tree ,
OG_06_0003915 (SeedPlants) Phylogenetic Tree(s): OG_06_0003915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032277_P001
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00027450 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G72670 iqd8 IQ-domain 8 0.03 Archaeplastida
GSVIVT01035382001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_01817 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g09790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp5g20460.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c2_3650V3.1 No alias IQ-domain 6 0.04 Archaeplastida
Solyc03g121760.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc08g062940.4.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e016563_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e020006_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 83 102
No external refs found!