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  5. Zm00001e032424_P002

Zm00001e032424_P002


Description : SUMO ligase component NSE2 of homologous recombination repair Smc5-Smc6 complex. SUMO E3 ligase (HPY2)


Gene families : OG0006193 (Archaeplastida) Phylogenetic Tree(s): OG0006193_tree ,
OG_05_0006827 (LandPlants) Phylogenetic Tree(s): OG_05_0006827_tree ,
OG_06_0008216 (SeedPlants) Phylogenetic Tree(s): OG_06_0008216_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032424_P002
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g48880.1 No alias SUMO ligase component NSE2 of homologous recombination... 0.03 Archaeplastida
Mp1g09520.1 No alias SUMO ligase component NSE2 of homologous recombination... 0.03 Archaeplastida
Mp4g01020.1 No alias SUMO ligase component NSE2 of homologous recombination... 0.03 Archaeplastida
Solyc07g062780.3.1 No alias SUMO ligase component NSE2 of homologous recombination... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0007021 tubulin complex assembly IEP Neighborhood
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0030915 Smc5-Smc6 complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0045048 protein insertion into ER membrane IEP Neighborhood
MF GO:0048487 beta-tubulin binding IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0106068 SUMO ligase complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004181 Znf_MIZ 137 198
No external refs found!