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  5. Zm00001e032433_P003

Zm00001e032433_P003


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0001039 (SeedPlants) Phylogenetic Tree(s): OG_06_0001039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032433_P003
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00122680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00012p00149750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
AMTR_s00021p00189010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00023p00181320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G17950 WUS, PGA6, WUS1 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.09 Archaeplastida
AT2G33880 STIP, HB-3, WOX9 homeobox-3 0.04 Archaeplastida
AT3G03660 WOX11 WUSCHEL related homeobox 11 0.03 Archaeplastida
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.04 Archaeplastida
AT3G18010 WOX1 WUSCHEL related homeobox 1 0.03 Archaeplastida
AT5G05770 WOX7 WUSCHEL related homeobox 7 0.04 Archaeplastida
AT5G17810 WOX12 WUSCHEL related homeobox 12 0.02 Archaeplastida
GSVIVT01008424001 No alias RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
GSVIVT01009453001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_27283 No alias transcription factor (WOX) 0.02 Archaeplastida
Gb_29958 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os01g62310.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os01g63510.1 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os03g20910.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os04g56780.1 No alias transcription factor (WOX) 0.04 Archaeplastida
LOC_Os05g02730.1 No alias transcription factor (WOX) 0.13 Archaeplastida
LOC_Os05g48990.1 No alias transcription factor (WOX) 0.14 Archaeplastida
LOC_Os08g14400.1 No alias transcription factor (WOX) 0.03 Archaeplastida
MA_10234279g0010 No alias transcription factor (WOX) 0.04 Archaeplastida
MA_10344604g0010 No alias transcription factor (WOX) 0.05 Archaeplastida
MA_129591g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_33318g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_747816g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_8832398g0010 No alias transcription factor (WOX) 0.05 Archaeplastida
MA_8850184g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g077390.2.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Solyc03g118770.4.1 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc06g072890.3.1 No alias transcription factor (WOX) 0.01 Archaeplastida
Solyc06g075567.1.1 No alias transcription factor (WOX) 0.05 Archaeplastida
Solyc11g072770.2.1 No alias transcription factor (WOX) 0.04 Archaeplastida
Solyc11g072790.2.1 No alias transcription factor (WOX) 0.05 Archaeplastida
Zm00001e001527_P001 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e009121_P001 No alias transcription factor (WOX) 0.07 Archaeplastida
Zm00001e019245_P001 No alias transcription factor (WOX) 0.01 Archaeplastida
Zm00001e024169_P001 No alias transcription factor (WOX) 0.06 Archaeplastida
Zm00001e028720_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e038272_P001 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e041785_P001 No alias transcription factor (WOX) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003713 transcription coactivator activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 53 113
No external refs found!