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  5. Zm00001e032487_P001

Zm00001e032487_P001


Description : transcription factor (MADS/AGL)


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032487_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00193200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AT2G26320 AGL33 AGAMOUS-like 33 0.03 Archaeplastida
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.04 Archaeplastida
GSVIVT01010221001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
GSVIVT01022182001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
Gb_28337 No alias MADS-box transcription factor 6 OS=Oryza sativa subsp.... 0.01 Archaeplastida
LOC_Os02g07430.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os02g45770.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os04g52410.2 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os05g34940.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_101463g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_10289256g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_20180g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_333471g0010 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
MA_44428g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_51624g0010 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
MA_5917g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_6544g0010 No alias Floral homeotic protein AGAMOUS OS=Panax ginseng... 0.03 Archaeplastida
MA_758606g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.01 Archaeplastida
MA_78010g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_7858089g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Pp3c25_6940V3.1 No alias AGAMOUS-like 62 0.02 Archaeplastida
Solyc01g106700.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc02g071730.4.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Solyc02g091550.2.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc04g076280.4.1 No alias MADS-box protein SVP OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc05g051825.1.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc08g067230.4.1 No alias No annotation 0.02 Archaeplastida
Zm00001e036127_P002 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 18 65
No external refs found!