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  5. Zm00001e033145_P002

Zm00001e033145_P002


Description : KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica (sp|q75gr5|spin1_orysj : 440.0)


Gene families : OG0001008 (Archaeplastida) Phylogenetic Tree(s): OG0001008_tree ,
OG_05_0000848 (LandPlants) Phylogenetic Tree(s): OG_05_0000848_tree ,
OG_06_0001767 (SeedPlants) Phylogenetic Tree(s): OG_06_0001767_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e033145_P002
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014762001 No alias KH domain-containing protein At5g56140 OS=Arabidopsis thaliana 0.02 Archaeplastida
Pp3c17_23570V3.1 No alias RNA-binding KH domain-containing protein 0.02 Archaeplastida
Solyc09g031930.3.1 No alias KH domain-containing protein At2g38610 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR032377 STAR_dimer 23 71
IPR004088 KH_dom_type_1 138 185
No external refs found!