Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 508.0)
Gene families : OG0021291 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0015615 (LandPlants) Phylogenetic Tree(s): OG_05_0015615_tree ,
OG_06_0015319 (SeedPlants) Phylogenetic Tree(s): OG_06_0015319_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e033171_P001 | |
Cluster | HCCA: Cluster_158 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os07g13540.1 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Neighborhood |
MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 600 | 724 |
IPR002885 | Pentatricopeptide_repeat | 329 | 358 |
IPR002885 | Pentatricopeptide_repeat | 91 | 117 |
IPR002885 | Pentatricopeptide_repeat | 501 | 524 |
IPR002885 | Pentatricopeptide_repeat | 162 | 189 |
IPR002885 | Pentatricopeptide_repeat | 194 | 217 |
IPR002885 | Pentatricopeptide_repeat | 298 | 318 |
IPR002885 | Pentatricopeptide_repeat | 222 | 265 |
IPR002885 | Pentatricopeptide_repeat | 426 | 474 |
No external refs found! |