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  5. Zm00001e033396_P003

Zm00001e033396_P003


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e033396_P003
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00224230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00061p00096800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT4G28610 PHR1, AtPHR1 phosphate starvation response 1 0.04 Archaeplastida
Gb_06138 No alias G2-like GARP transcription factor 0.09 Archaeplastida
LOC_Os07g25710.2 No alias PHR1 transcription factor involved in proline synthesis... 0.04 Archaeplastida
Mp4g07330.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c7_20870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Solyc09g072830.4.1 No alias PHR1 transcription factor involved in proline synthesis... 0.05 Archaeplastida
Solyc11g067280.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 361 405
IPR001005 SANT/Myb 244 295
No external refs found!