1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G48770

AT3G48770


Description : DNA binding;ATP binding


Gene families : OG0001952 (Archaeplastida) Phylogenetic Tree(s): OG0001952_tree ,
OG_05_0002082 (LandPlants) Phylogenetic Tree(s): OG_05_0002082_tree ,
OG_06_0001262 (SeedPlants) Phylogenetic Tree(s): OG_06_0001262_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G48770
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008603001 No alias No description available 0.03 Archaeplastida
GSVIVT01008605001 No alias No description available 0.04 Archaeplastida
LOC_Os12g29350.1 No alias no description available(sp|f4jts8|nov_arath : 141.0) 0.02 Archaeplastida
MA_10182981g0010 No alias no description available(sp|f4jts8|nov_arath : 108.0) 0.04 Archaeplastida
Zm00001e011216_P001 No alias no description available(sp|f4jts8|nov_arath : 149.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000059 obsolete protein import into nucleus, docking IEP Neighborhood
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000987 proximal promoter sequence-specific DNA binding IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP Neighborhood
MF GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0004835 tubulin-tyrosine ligase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005945 6-phosphofructokinase complex IEP Neighborhood
BP GO:0006011 UDP-glucose metabolic process IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
CC GO:0008278 cohesin complex IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Neighborhood
MF GO:0009008 DNA-methyltransferase activity IEP Neighborhood
BP GO:0009566 fertilization IEP Neighborhood
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0010032 meiotic chromosome condensation IEP Neighborhood
BP GO:0010424 DNA methylation on cytosine within a CG sequence IEP Neighborhood
MF GO:0010428 methyl-CpNpG binding IEP Neighborhood
MF GO:0010429 methyl-CpNpN binding IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
MF GO:0010491 UTP:arabinose-1-phosphate uridylyltransferase activity IEP Neighborhood
BP GO:0010528 regulation of transposition IEP Neighborhood
BP GO:0010529 negative regulation of transposition IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Neighborhood
MF GO:0017103 UTP:galactose-1-phosphate uridylyltransferase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
BP GO:0031935 regulation of chromatin silencing IEP Neighborhood
BP GO:0031937 positive regulation of chromatin silencing IEP Neighborhood
BP GO:0032776 DNA methylation on cytosine IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0033356 UDP-L-arabinose metabolic process IEP Neighborhood
MF GO:0035197 siRNA binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0046398 UDP-glucuronate metabolic process IEP Neighborhood
BP GO:0046937 phytochelatin metabolic process IEP Neighborhood
BP GO:0046938 phytochelatin biosynthetic process IEP Neighborhood
MF GO:0047268 galactinol-raffinose galactosyltransferase activity IEP Neighborhood
MF GO:0047338 UTP:xylose-1-phosphate uridylyltransferase activity IEP Neighborhood
MF GO:0047350 glucuronate-1-phosphate uridylyltransferase activity IEP Neighborhood
BP GO:0048240 sperm capacitation IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048830 adventitious root development IEP Neighborhood
BP GO:0051054 positive regulation of DNA metabolic process IEP Neighborhood
BP GO:0051177 meiotic sister chromatid cohesion IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation IEP Neighborhood
BP GO:0051455 attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation IEP Neighborhood
MF GO:0051748 UTP-monosaccharide-1-phosphate uridylyltransferase activity IEP Neighborhood
BP GO:0051754 meiotic sister chromatid cohesion, centromeric IEP Neighborhood
BP GO:0052573 UDP-D-galactose metabolic process IEP Neighborhood
BP GO:0060341 regulation of cellular localization IEP Neighborhood
BP GO:0060968 regulation of gene silencing IEP Neighborhood
MF GO:0061980 regulatory RNA binding IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0070601 centromeric sister chromatid cohesion IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0080188 RNA-directed DNA methylation IEP Neighborhood
BP GO:0090308 regulation of methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0090309 positive regulation of methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903827 regulation of cellular protein localization IEP Neighborhood
BP GO:1905269 positive regulation of chromatin organization IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:2000008 regulation of protein localization to cell surface IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
BP GO:2001252 positive regulation of chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR003656 Znf_BED 28 76
No external refs found!