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  5. Zm00001e033628_P002

Zm00001e033628_P002


Description : BIG auxin transport regulator protein


Gene families : OG0001460 (Archaeplastida) Phylogenetic Tree(s): OG0001460_tree ,
OG_05_0004241 (LandPlants) Phylogenetic Tree(s): OG_05_0004241_tree ,
OG_06_0005517 (SeedPlants) Phylogenetic Tree(s): OG_06_0005517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e033628_P002
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248360 evm_27.TU.AmTr_v1... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.17 Archaeplastida
AMTR_s00090p00114080 evm_27.TU.AmTr_v1... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.06 Archaeplastida
AT3G02260 DOC1, ASA1,... auxin transport protein (BIG) 0.1 Archaeplastida
Cpa|evm.model.tig00000158.22 No alias Auxin transport protein BIG OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00000158.23 No alias Auxin transport protein BIG OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01036538001 No alias Phytohormones.auxin.transport.polar auxin transport.BIG... 0.06 Archaeplastida
Gb_03145 No alias BIG auxin transport regulator protein 0.07 Archaeplastida
LOC_Os09g07300.1 No alias BIG auxin transport regulator protein 0.14 Archaeplastida
MA_10425891g0010 No alias BIG auxin transport regulator protein 0.11 Archaeplastida
MA_10436857g0010 No alias Auxin transport protein BIG OS=Arabidopsis thaliana... 0.17 Archaeplastida
MA_10437010g0010 No alias No annotation 0.06 Archaeplastida
MA_10437010g0020 No alias Auxin transport protein BIG OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10437010g0030 No alias Auxin transport protein BIG OS=Oryza sativa subsp.... 0.07 Archaeplastida
MA_141071g0010 No alias Auxin transport protein BIG OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_14729g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_18467g0010 No alias Auxin transport protein BIG OS=Oryza sativa subsp.... 0.09 Archaeplastida
MA_92502g0010 No alias Rac-like GTP-binding protein 7 OS=Oryza sativa subsp.... 0.09 Archaeplastida
Mp2g04600.1 No alias BIG auxin transport regulator protein 0.04 Archaeplastida
Pp3c11_22340V3.1 No alias auxin transport protein (BIG) 0.07 Archaeplastida
Pp3c7_7030V3.1 No alias auxin transport protein (BIG) 0.04 Archaeplastida
Smo141341 No alias Phytohormones.auxin.transport.polar auxin transport.BIG... 0.07 Archaeplastida
Smo444506 No alias Phytohormones.auxin.transport.polar auxin transport.BIG... 0.02 Archaeplastida
Solyc02g089260.4.1 No alias BIG auxin transport regulator protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025704 E3_Ub_ligase_UBR4 4141 5038
IPR000433 Znf_ZZ 2571 2603
No external refs found!