AT3G48990


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG0003595 (Archaeplastida) Phylogenetic Tree(s): OG0003595_tree ,
OG_05_0004913 (LandPlants) Phylogenetic Tree(s): OG_05_0004913_tree ,
OG_06_0004850 (SeedPlants) Phylogenetic Tree(s): OG_06_0004850_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G48990
Cluster HCCA: Cluster_395

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019771001 No alias Oxalate--CoA ligase OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_10140485g0010 No alias Oxalate--CoA ligase OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_218203g0010 No alias Oxalate--CoA ligase OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_896570g0010 No alias Oxalate--CoA ligase OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_9822554g0010 No alias Oxalate--CoA ligase OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
BP GO:0009735 response to cytokinin IDA Interproscan
BP GO:0010030 positive regulation of seed germination IMP Interproscan
BP GO:0010167 response to nitrate RCA Interproscan
BP GO:0010214 seed coat development IMP Interproscan
BP GO:0015706 nitrate transport RCA Interproscan
MF GO:0016208 AMP binding ISS Interproscan
BP GO:0033611 oxalate catabolic process IDA Interproscan
BP GO:0046482 para-aminobenzoic acid metabolic process RCA Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
CC GO:0048046 apoplast IDA Interproscan
MF GO:0050203 oxalate-CoA ligase activity IDA Interproscan
BP GO:0050832 defense response to fungus IMP Interproscan
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
BP GO:0002218 activation of innate immune response IEP Neighborhood
BP GO:0002220 innate immune response activating cell surface receptor signaling pathway IEP Neighborhood
BP GO:0002221 pattern recognition receptor signaling pathway IEP Neighborhood
BP GO:0002237 response to molecule of bacterial origin IEP Neighborhood
BP GO:0002238 response to molecule of fungal origin IEP Neighborhood
BP GO:0002253 activation of immune response IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
BP GO:0002429 immune response-activating cell surface receptor signaling pathway IEP Neighborhood
BP GO:0002684 positive regulation of immune system process IEP Neighborhood
BP GO:0002752 cell surface pattern recognition receptor signaling pathway IEP Neighborhood
BP GO:0002757 immune response-activating signal transduction IEP Neighborhood
BP GO:0002758 innate immune response-activating signal transduction IEP Neighborhood
BP GO:0002764 immune response-regulating signaling pathway IEP Neighborhood
BP GO:0002768 immune response-regulating cell surface receptor signaling pathway IEP Neighborhood
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0003958 NADPH-hemoprotein reductase activity IEP Neighborhood
MF GO:0004300 enoyl-CoA hydratase activity IEP Neighborhood
MF GO:0004352 glutamate dehydrogenase (NAD+) activity IEP Neighborhood
MF GO:0004353 glutamate dehydrogenase [NAD(P)+] activity IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Neighborhood
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP Neighborhood
MF GO:0004448 isocitrate dehydrogenase activity IEP Neighborhood
MF GO:0004449 isocitrate dehydrogenase (NAD+) activity IEP Neighborhood
MF GO:0004864 protein phosphatase inhibitor activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006102 isocitrate metabolic process IEP Neighborhood
BP GO:0006493 protein O-linked glycosylation IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006954 inflammatory response IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009595 detection of biotic stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009704 de-etiolation IEP Neighborhood
MF GO:0009824 AMP dimethylallyltransferase activity IEP Neighborhood
BP GO:0009868 jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway IEP Neighborhood
CC GO:0009897 external side of plasma membrane IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010204 defense response signaling pathway, resistance gene-independent IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0010959 regulation of metal ion transport IEP Neighborhood
MF GO:0015105 arsenite transmembrane transporter activity IEP Neighborhood
BP GO:0015700 arsenite transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016508 long-chain-enoyl-CoA hydratase activity IEP Neighborhood
MF GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019212 phosphatase inhibitor activity IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0030544 Hsp70 protein binding IEP Neighborhood
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP Neighborhood
CC GO:0031307 integral component of mitochondrial outer membrane IEP Neighborhood
BP GO:0031349 positive regulation of defense response IEP Neighborhood
BP GO:0032490 detection of molecule of bacterial origin IEP Neighborhood
BP GO:0032491 detection of molecule of fungal origin IEP Neighborhood
BP GO:0032494 response to peptidoglycan IEP Neighborhood
BP GO:0032499 detection of peptidoglycan IEP Neighborhood
CC GO:0032592 integral component of mitochondrial membrane IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0035690 cellular response to drug IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0042891 antibiotic transport IEP Neighborhood
BP GO:0043270 positive regulation of ion transport IEP Neighborhood
MF GO:0043295 glutathione binding IEP Neighborhood
BP GO:0043434 response to peptide hormone IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0045089 positive regulation of innate immune response IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
BP GO:0048358 mucilage pectin biosynthetic process IEP Neighborhood
BP GO:0048363 mucilage pectin metabolic process IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0050778 positive regulation of immune response IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051050 positive regulation of transport IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051924 regulation of calcium ion transport IEP Neighborhood
BP GO:0051928 positive regulation of calcium ion transport IEP Neighborhood
MF GO:0052622 ATP dimethylallyltransferase activity IEP Neighborhood
MF GO:0052623 ADP dimethylallyltransferase activity IEP Neighborhood
MF GO:0052742 phosphatidylinositol kinase activity IEP Neighborhood
BP GO:0060416 response to growth hormone IEP Neighborhood
MF GO:0070405 ammonium ion binding IEP Neighborhood
BP GO:0071216 cellular response to biotic stimulus IEP Neighborhood
BP GO:0071219 cellular response to molecule of bacterial origin IEP Neighborhood
BP GO:0071310 cellular response to organic substance IEP Neighborhood
BP GO:0071323 cellular response to chitin IEP Neighborhood
BP GO:0071417 cellular response to organonitrogen compound IEP Neighborhood
BP GO:0071495 cellular response to endogenous stimulus IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080148 negative regulation of response to water deprivation IEP Neighborhood
BP GO:0080163 regulation of protein serine/threonine phosphatase activity IEP Neighborhood
BP GO:0080170 hydrogen peroxide transmembrane transport IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
MF GO:1900750 oligopeptide binding IEP Neighborhood
BP GO:1901652 response to peptide IEP Neighborhood
BP GO:1901699 cellular response to nitrogen compound IEP Neighborhood
BP GO:2000070 regulation of response to water deprivation IEP Neighborhood
MF GO:2001080 chitosan binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 11 416
IPR025110 AMP-bd_C 425 500
No external refs found!