1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e033879_P003

Zm00001e033879_P003


Description : cyclin (CYCT). regulatory component of CTDK-I polymerase-II kinase complex


Gene families : OG0000352 (Archaeplastida) Phylogenetic Tree(s): OG0000352_tree ,
OG_05_0029531 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0028041 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e033879_P003
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.112 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.02 Archaeplastida
Cpa|evm.model.tig00021433.26 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.01 Archaeplastida
Cre14.g613900 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.03 Archaeplastida
GSVIVT01017929001 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.03 Archaeplastida
GSVIVT01020870001 No alias Cell cycle.regulation.cyclins.CYCL-type cyclin 0.03 Archaeplastida
Gb_13680 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.03 Archaeplastida
LOC_Os02g24190.2 No alias cyclin (CYCT) 0.04 Archaeplastida
LOC_Os12g30020.2 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.03 Archaeplastida
MA_101777g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp3g00720.1 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.05 Archaeplastida
Mp3g11260.1 No alias cyclin (CYCL) 0.02 Archaeplastida
Pp3c2_24723V3.1 No alias Cyclin family protein 0.04 Archaeplastida
Pp3c7_14590V3.1 No alias Cyclin family protein 0.03 Archaeplastida
Pp3c9_26180V3.1 No alias arginine-rich cyclin 1 0.03 Archaeplastida
Smo140469 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Solyc01g098350.3.1 No alias cyclin (CYCL) 0.04 Archaeplastida
Solyc10g078180.3.1 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.02 Archaeplastida
Zm00001e000132_P005 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.04 Archaeplastida
Zm00001e041389_P001 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000228 nuclear chromosome IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006906 vesicle fusion IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016050 vesicle organization IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Neighborhood
BP GO:0048284 organelle fusion IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0061025 membrane fusion IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0090174 organelle membrane fusion IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006671 Cyclin_N 36 178
No external refs found!