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  5. Zm00001e033936_P001

Zm00001e033936_P001


Description : Probable metal-nicotianamine transporter YSL16 OS=Oryza sativa subsp. japonica (sp|q7xn54|ysl16_orysj : 153.0)


Gene families : OG0000193 (Archaeplastida) Phylogenetic Tree(s): OG0000193_tree ,
OG_05_0005106 (LandPlants) Phylogenetic Tree(s): OG_05_0005106_tree ,
OG_06_0004065 (SeedPlants) Phylogenetic Tree(s): OG_06_0004065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e033936_P001
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.03 Archaeplastida
GSVIVT01012036001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.02 Archaeplastida
MA_110581g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.05 Archaeplastida
MA_7826635g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_924600g0010 No alias Probable metal-nicotianamine transporter YSL6... 0.02 Archaeplastida
Pp3c2_34990V3.1 No alias YELLOW STRIPE like 6 0.03 Archaeplastida
Pp3c7_20710V3.1 No alias YELLOW STRIPE like 6 0.01 Archaeplastida
Solyc03g082620.4.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Zm00001e007025_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e015193_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004813 OPT 4 92
No external refs found!