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  5. AT3G49150

AT3G49150


Description : F-box/RNI-like superfamily protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G49150
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT2G29910 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
AT2G29930 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.06 Archaeplastida
AT2G42730 No alias F-box family protein 0.04 Archaeplastida
AT3G42770 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT3G44060 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G44080 No alias F-box family protein 0.03 Archaeplastida
AT3G44090 No alias F-box family protein 0.05 Archaeplastida
AT3G44180 No alias syntaxin-related family protein 0.02 Archaeplastida
AT3G58860 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G58875 No alias No description available 0.03 Archaeplastida
AT3G58960 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT3G59000 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G59190 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G59200 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G59230 No alias RNI-like superfamily protein 0.06 Archaeplastida
AT3G59240 No alias RNI-like superfamily protein 0.06 Archaeplastida
AT3G62440 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT4G13960 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT5G15620 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G25860 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.04 Archaeplastida
AT5G38392 No alias No description available 0.08 Archaeplastida
AT5G38396 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G41630 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000162 tryptophan biosynthetic process IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Neighborhood
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
CC GO:0005834 heterotrimeric G-protein complex IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0010492 maintenance of shoot apical meristem identity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019478 D-amino acid catabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
BP GO:0032877 positive regulation of DNA endoreduplication IEP Neighborhood
MF GO:0035197 siRNA binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042023 DNA endoreduplication IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0044786 cell cycle DNA replication IEP Neighborhood
BP GO:0045740 positive regulation of DNA replication IEP Neighborhood
BP GO:0046219 indolalkylamine biosynthetic process IEP Neighborhood
BP GO:0046416 D-amino acid metabolic process IEP Neighborhood
BP GO:0051054 positive regulation of DNA metabolic process IEP Neighborhood
MF GO:0061980 regulatory RNA binding IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0090068 positive regulation of cell cycle process IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1905360 GTPase complex IEP Neighborhood
BP GO:2000105 positive regulation of DNA-dependent DNA replication IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 17 51
No external refs found!