Zm00001e033965_P001

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000849 (SeedPlants) Phylogenetic Tree(s): OG_06_0000849_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e033965_P001
Cluster	HCCA: Cluster_188

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00006p00266920	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00010p00098700	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00040p00196580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00049p00214620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.02	Archaeplastida
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00099p00039760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00129p00119770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G53910	RAP2.12	related to AP2 12	0.03	Archaeplastida
AT2G40220	ABI4, SAN5,...	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.03	Archaeplastida
AT2G47520	HRE2	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G18560	PUCHI	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G19790	RAP2.11	related to AP2 11	0.02	Archaeplastida
AT5G25810	tny	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G44210	ATERF-9, ERF9, ATERF9	erf domain protein 9	0.02	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01032983001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_08541	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_11794	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_36992	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_39497	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g10370.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os01g64790.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g06330.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os02g09650.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
LOC_Os02g43970.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os03g08470.1	No alias	Ethylene-responsive transcription factor 1 OS=Oryza...	0.03	Archaeplastida
LOC_Os03g09170.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g57340.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g25260.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
LOC_Os06g47590.1	No alias	no hits & (original description: none)	0.08	Archaeplastida
LOC_Os08g41030.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
LOC_Os09g20350.1	No alias	transcription factor (DREB)	0.07	Archaeplastida
LOC_Os10g41130.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10426586g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10430231g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
MA_120531g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_19532g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_3405g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_446533g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_6677438g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_81029g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_9588449g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Pp3c4_2660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c4_2680V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Solyc01g067540.2.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc03g117230.1.1	No alias	Ethylene-responsive transcription factor ERF084...	0.03	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g050830.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc10g050960.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc11g042560.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc12g056980.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e013927_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e024001_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e025064_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e025840_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e030279_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e031438_P002	No alias	Ethylene-responsive transcription factor RAP2-3...	0.03	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0022607	cellular component assembly	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0043933	protein-containing complex subunit organization	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
MF	GO:0071949	FAD binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	119	167

External Links

No external refs found!

Zm00001e033965_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation