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  5. Zm00001e034034_P004

Zm00001e034034_P004


Description : component BAH of BAH-EMF1 Polycomb silencing complex


Gene families : OG0000832 (Archaeplastida) Phylogenetic Tree(s): OG0000832_tree ,
OG_05_0001161 (LandPlants) Phylogenetic Tree(s): OG_05_0001161_tree ,
OG_06_0001820 (SeedPlants) Phylogenetic Tree(s): OG_06_0001820_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034034_P004
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00245890 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
GSVIVT01004809001 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
LOC_Os08g32620.1 No alias component BAH of BAH-EMF1 Polycomb silencing complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 140 188
IPR001025 BAH_dom 23 135
No external refs found!