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  5. Zm00001e034114_P001

Zm00001e034114_P001


Description : component RPL34 of LSU proteome component


Gene families : OG0001700 (Archaeplastida) Phylogenetic Tree(s): OG0001700_tree ,
OG_05_0001610 (LandPlants) Phylogenetic Tree(s): OG_05_0001610_tree ,
OG_06_0002125 (SeedPlants) Phylogenetic Tree(s): OG_06_0002125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034114_P001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00260490 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
AMTR_s00010p00260730 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 Archaeplastida
AT1G26880 No alias Ribosomal protein L34e superfamily protein 0.38 Archaeplastida
AT1G69620 RPL34 ribosomal protein L34 0.31 Archaeplastida
AT3G28900 No alias Ribosomal protein L34e superfamily protein 0.33 Archaeplastida
Cpa|evm.model.tig00000632.3 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Cre16.g661050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.38 Archaeplastida
GSVIVT01011419001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
GSVIVT01019985001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.35 Archaeplastida
Gb_36060 No alias component RPL34 of LSU proteome component 0.08 Archaeplastida
LOC_Os08g06040.1 No alias component RPL34 of LSU proteome component 0.44 Archaeplastida
LOC_Os08g33920.1 No alias component RPL34 of LSU proteome component 0.18 Archaeplastida
LOC_Os09g24690.1 No alias component RPL34 of LSU proteome component 0.35 Archaeplastida
MA_109553g0010 No alias component RPL34 of LSU proteome component 0.24 Archaeplastida
MA_175574g0010 No alias component RPL34 of LSU proteome component 0.21 Archaeplastida
MA_7581523g0010 No alias component RPL34 of LSU proteome component 0.24 Archaeplastida
Mp4g17040.1 No alias component RPL34 of LSU proteome component 0.36 Archaeplastida
Pp3c11_2940V3.1 No alias Ribosomal protein L34e superfamily protein 0.3 Archaeplastida
Pp3c11_3090V3.1 No alias Ribosomal protein L34e superfamily protein 0.08 Archaeplastida
Pp3c1_1800V3.1 No alias Ribosomal protein L34e superfamily protein 0.27 Archaeplastida
Pp3c25_11980V3.1 No alias Ribosomal protein L34e superfamily protein 0.27 Archaeplastida
Pp3c2_34570V3.1 No alias Ribosomal protein L34e superfamily protein 0.24 Archaeplastida
Pp3c7_21380V3.1 No alias Ribosomal protein L34e superfamily protein 0.22 Archaeplastida
Smo113433 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
Solyc02g087930.3.1 No alias component RPL34 of LSU proteome component 0.06 Archaeplastida
Solyc05g007560.3.1 No alias component RPL34 of LSU proteome component 0.41 Archaeplastida
Solyc06g069860.4.1 No alias component RPL34 of LSU proteome component 0.41 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 1 96
No external refs found!