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  5. Zm00001e034119_P001

Zm00001e034119_P001


Description : transcription factor (zf-HD)


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034119_P001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00027320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00070p00154800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00099p00145100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00119p00074870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT1G14687 AtHB32, HB32, ZHD14 homeobox protein 32 0.04 Archaeplastida
AT1G69600 ATHB29, ZFHD1, ZHD11 zinc finger homeodomain 1 0.05 Archaeplastida
AT1G75240 AtHB33, ZHD5, HB33 homeobox protein 33 0.03 Archaeplastida
AT3G28920 HB34, ZHD9, AtHB34 homeobox protein 34 0.05 Archaeplastida
AT5G15210 ZHD8, ATHB30, ZFHD3, HB30 homeobox protein 30 0.02 Archaeplastida
AT5G39760 ZHD10, AtHB23, HB23 homeobox protein 23 0.03 Archaeplastida
AT5G65410 ZHD1, ZFHD2, HB25, ATHB25 homeobox protein 25 0.05 Archaeplastida
GSVIVT01000250001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01000386001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01003614001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
LOC_Os04g35500.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os08g37400.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os09g29130.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os12g03110.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os12g10630.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
MA_19630g0030 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Pp3c19_20410V3.1 No alias homeobox protein 21 0.02 Archaeplastida
Pp3c2_21160V3.1 No alias homeobox protein 33 0.03 Archaeplastida
Pp3c7_15000V3.1 No alias homeobox protein 33 0.03 Archaeplastida
Smo59934 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Solyc01g102980.3.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Solyc03g116070.1.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Solyc04g014260.2.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Solyc04g080490.4.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 35 87
No external refs found!